Selected Publications

Google Scholar Profile:

1)    Daneshvar, K., Ardehali, M.B., Klein, I.A., Kratkiewicz, A.J., Zhou, C., Mahpour, A., Cook, B.M., Li, W., Pondick, J.P., Moran, S.P., Young, Richard A., Kingston, Robert E., and Mullen, Alan C. (2020). lncRNA DIGIT and BRD3 protein form phase-separated condensates to regulate endoderm differentiation. Nature Cell Biology.


2)    Zhou, C., Molinie, B., Daneshvar, K., Pondick, J.V., Wang, J., Van Wittenberghe, N., Xing, Y., Giallourakis, C.C., and Mullen, A.C. (2017). Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs. Cell Reports. 20, 2262–2276.


3)    Daneshvar, K., Pondick, J.V., Kim, B.-M., Zhou, C., York, S.R., Macklin, J.A., Abualteen, A., Tan, B., Sigova, A.A., Marcho, C., et al. (2016). DIGIT Is a Conserved Long Noncoding RNA that Regulates GSC Expression to Control Definitive Endoderm Differentiation of Embryonic Stem Cells. Cell Reports. 17, 1–13.


4)    Molinie, B., Wang, J., Lim, K.S., Hillebrand, R., Lu, Z.-X., Van Wittenberghe, N., Howard, B.D., Daneshvar, K., Mullen, A.C., Dedon, P., et al. (2016). m6A-LAIC-seq reveals the census and complexity of the m6A epitranscriptome. Nature Methods 13, 692–698.


5)    Daneshvar, K. (2015) CRISPR-Cas9 in gene therapy: much control on breaking, little control on repairing. PeerJ.


6)    Batista, P.J., Molinie, B., Wang, J., Qu, K., Zhang, J., Li, L., Bouley, D.M., Lujan, E., Haddad, B., Daneshvar, K., et al. (2014). m6A RNA Modification Controls Cell Fate Transition in Mammalian Embryonic Stem Cells. Cell Stem Cell 1–13.


7)    Daneshvar, K., Nath, S., Khan, A., Shover, W., Richardson, C., and Goodliffe, J.M. (2013). MicroRNA miR-308 regulates dMyc through a negative feedback loop in Drosophila. Biology Open 2, 1–


8)    Nath, S., Daneshvar, K., Roy, L.D., Grover, P., Kidiyoor, A., Mosley, L., Sahraei, M., and Mukherjee, P. (2013). MUC1 induces drug resistance in pancreatic cancer cells via upregulation of multidrug resistance genes. Oncogenesis 2, e51.

9) Daneshvar, K., Khan, A., and Goodliffe, J.M. (2011). Myc Localizes to Histone Locus Bodies during Replication in Drosophila. PLoS One, 6, e23928. 


Invited talks

Oral Presentations